Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | K7R23_25035 | Not Available | Positive | 5285054 - 5285374 | 11789.1 |
| Hypothetical protein | K7R23_25040 | Not Available | Positive | 5285374 - 5285874 | 18549.2 |
| Adenine dna methyltransferase | K7R23_25045 | Q9S4X2 | Positive | 5285921 - 5286661 | 27198.4 |
| Terminase | K7R23_25050 | Not Available | Positive | 5286663 - 5288303 | 62287.8 |
| Putative portal protein | K7R23_25055 | P44225 | Positive | 5288303 - 5289898 | 59095.3 |
| Virion morphogenesis protein | K7R23_25060 | Q01259 | Positive | 5289885 - 5291051 | 43357.9 |
| Phage virion morphogenesis family protein | K7R23_25065 | P45255 | Positive | 5291048 - 5291599 | 20569.5 |
| Protease (i) and scaffold (z) protein | K7R23_25070 | Q01267 | Positive | 5291809 - 5292924 | 39787.9 |
| Hypothetical protein | K7R23_25075 | Not Available | Positive | 5292925 - 5293320 | 13539.8 |
| Putative major head subunit protein | K7R23_25080 | Q9T1W1 | Positive | 5293331 - 5294239 | 33967.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

