Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K7R23_24985 | Not Available | Positive | 5280181 - 5280411 | 8261.46 |
| hypothetical protein | K7R23_24990 | Not Available | Positive | 5280492 - 5280770 | 10500.4 |
| Hypothetical protein | K7R23_24995 | P71387 | Positive | 5280742 - 5281155 | 15535.0 |
| Mor transcription activator family protein | K7R23_25000 | Not Available | Positive | 5281251 - 5281721 | 17422.2 |
| Issod7, transposase | K7R23_25005 | P30192 | Negative | 5281714 - 5283051 | 50735.4 |
| hypothetical protein | K7R23_25010 | Not Available | Positive | 5283186 - 5283464 | 10162.0 |
| Putative holin | K7R23_25015 | Not Available | Positive | 5283647 - 5284039 | 13369.5 |
| Putative holin | K7R23_25020 | Not Available | Positive | 5284029 - 5284325 | 11269.2 |
| Endolysin | K7R23_25025 | Not Available | Positive | 5284309 - 5284854 | 20390.1 |
| hypothetical protein | K7R23_25030 | Not Available | Positive | 5284851 - 5285033 | 6812.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

