Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Truncated transposase | K7R23_21800 | P0CF49 | Positive | 4602261 - 4602938 | 25237.8 |
| Transposase | K7R23_21805 | P50359 | Positive | 4602938 - 4603285 | 13069.1 |
| Transposase | K7R23_21810 | P50360 | Positive | 4603305 - 4604876 | 58608.9 |
| Gin | K7R23_21815 | P03013 | Positive | 4605181 - 4605741 | 20917.3 |
| Attr | Not Available | Not Available | Positive | 4618319 - 4618330 | Not Available |
| Phage transposase | K7R23_24910 | Not Available | Positive | 5271651 - 5273693 | 77665.0 |
| Phage transposase | K7R23_24915 | P96343 | Positive | 5273711 - 5274604 | 33103.3 |
| hypothetical protein | K7R23_24920 | Not Available | Positive | 5274619 - 5274951 | 12695.3 |
| hypothetical protein | K7R23_24925 | Not Available | Positive | 5274993 - 5275217 | 8109.93 |
| hypothetical protein | K7R23_24930 | Not Available | Positive | 5275233 - 5275424 | 7115.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

