Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail terminator | K7R23_21750 | Not Available | Positive | 4595346 - 4596230 | 31021.9 |
| Gp20, phage tail protein x | K7R23_21755 | Not Available | Positive | 4596230 - 4596442 | 7856.44 |
| Tail protein | K7R23_21760 | P21679 | Positive | 4596430 - 4597599 | 42205.0 |
| Putative baseplate protein | K7R23_21765 | P31340 | Positive | 4597599 - 4598129 | 19061.9 |
| Putative baseplate assembly protein with lysozyme | K7R23_21770 | P51768 | Positive | 4598185 - 4598532 | 13387.1 |
| Baseplate protein | K7R23_21775 | P51767 | Positive | 4598523 - 4599626 | 39837.3 |
| Gp25, tail fiber | K7R23_21780 | P26701 | Positive | 4599619 - 4600197 | 21503.5 |
| Phage tail fiber protein | K7R23_21785 | P33227 | Positive | 4600200 - 4601039 | 29762.5 |
| Tail fiber assembly protein | K7R23_21790 | P09153 | Positive | 4601039 - 4601638 | 21403.5 |
| Tail fiber assembly protein | K7R23_21795 | P77656 | Negative | 4601610 - 4602035 | 15524.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

