Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp35 | K7R23_21700 | Not Available | Positive | 4588264 - 4588620 | 11438.6 |
| Gp36 | K7R23_21705 | P44230 | Positive | 4588622 - 4589068 | 16698.9 |
| Gp37 | K7R23_21710 | Not Available | Positive | 4589068 - 4589532 | 17293.8 |
| Gp38 | K7R23_21715 | Not Available | Positive | 4589532 - 4589783 | 9004.53 |
| Major tail sheath protein | K7R23_21720 | Q6QIB0 | Positive | 4589773 - 4591200 | 51191.5 |
| Gp14, phage major tail tube protein | K7R23_21725 | P22502 | Positive | 4591197 - 4591721 | 19509.6 |
| Hypothetical protein | K7R23_21730 | Not Available | Positive | 4591724 - 4592017 | 10665.6 |
| Hypothetical protein | K7R23_21735 | Not Available | Positive | 4592007 - 4592288 | 10413.7 |
| Gp41 | K7R23_21740 | Not Available | Positive | 4592385 - 4592726 | 12313.5 |
| Bacteriophage tail protein gpt | K7R23_21745 | Q6QIA5 | Positive | 4592878 - 4595346 | 88476.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

