Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | K7R23_21650 | Not Available | Positive | 4579868 - 4580521 | 24271.3 |
| Gp25 | K7R23_21655 | Not Available | Positive | 4580518 - 4580850 | 12768.3 |
| Hypothetical protein | K7R23_21660 | Not Available | Positive | 4580843 - 4581154 | 11930.3 |
| Gp1 | K7R23_21665 | P44223 | Positive | 4581154 - 4581699 | 20015.8 |
| Putative portal protein | K7R23_21670 | Q9T1W6 | Positive | 4581696 - 4583219 | 56669.1 |
| Putative portal protein | K7R23_21675 | Q9T1W5 | Positive | 4583219 - 4584715 | 55540.8 |
| Virion morphogenesis late f orf | K7R23_21680 | Q01259 | Positive | 4584696 - 4585517 | 31136.9 |
| Virion morphogenesis protein | K7R23_21685 | P45255 | Positive | 4585520 - 4585978 | 16512.4 |
| Gp6 | K7R23_21690 | Not Available | Positive | 4586184 - 4587284 | 40184.1 |
| Major capsid protein | K7R23_21695 | Q6QIB5 | Positive | 4587298 - 4588251 | 34605.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

