Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 4573389 - 4573400 | Not Available |
| Putative transposase a subunit | K7R23_21605 | Not Available | Negative | 4573424 - 4575193 | 64462.6 |
| Gp41 | K7R23_21610 | Not Available | Negative | 4575197 - 4576111 | 33736.1 |
| Hypothetical protein | K7R23_21615 | Not Available | Negative | 4576121 - 4576426 | 10764.0 |
| hypothetical protein | K7R23_21620 | Not Available | Negative | 4576423 - 4576647 | 8325.16 |
| Gp5 | K7R23_21625 | P44207 | Positive | 4576737 - 4577147 | 15481.6 |
| hypothetical protein | K7R23_21630 | Not Available | Positive | 4577183 - 4577716 | 19721.3 |
| Dna adenine methylase | K7R23_21635 | Q01511 | Negative | 4577771 - 4578541 | 29572.8 |
| Gp51 | K7R23_21640 | Not Available | Positive | 4578791 - 4579141 | 12645.2 |
| Gp22 | K7R23_21645 | A1S850 | Positive | 4579156 - 4579878 | 26860.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

