Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 4463811 - 4463823 | Not Available |
| Gp01 | K7R23_21560 | Q47588 | Negative | 4568817 - 4569206 | 14860.7 |
| Gp33 | K7R23_21565 | P24796 | Negative | 4569203 - 4569628 | 16154.9 |
| Hypothetical protein | K7R23_21570 | Not Available | Negative | 4569826 - 4570521 | 26085.1 |
| 1_nc_021802: nucleoside triphosphate pyrophosphohydrolase | K7R23_21575 | Not Available | Negative | 4570508 - 4570804 | 10965.4 |
| hypothetical protein | K7R23_21580 | Not Available | Negative | 4570819 - 4571091 | 10111.3 |
| hypothetical protein | K7R23_21585 | Not Available | Negative | 4571088 - 4571276 | 6840.46 |
| Hypothetical protein | K7R23_21590 | Not Available | Negative | 4571355 - 4571966 | 23057.4 |
| hypothetical protein | K7R23_21595 | Not Available | Negative | 4571984 - 4572253 | 9737.85 |
| Putative transposase b subunit | K7R23_21600 | P45754 | Negative | 4572256 - 4573413 | 42326.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

