Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Transposase | K7R23_21075 | P50359 | Positive | 4450153 - 4450500 | 13069.1 |
| Transposase | K7R23_21080 | P50360 | Positive | 4450520 - 4452091 | 58576.9 |
| Putative integrase | K7R23_21085 | Not Available | Positive | 4452389 - 4453058 | 23215.0 |
| Attr | Not Available | Not Available | Positive | 4453127 - 4453196 | Not Available |
| Attr | Not Available | Not Available | Positive | 4453186 - 4453200 | Not Available |
| Trna-ser; | Not Available | Not Available | Positive | 4453141 - 4453228 | Not Available |
| ftsh protease modulator ycca | K7R23_21095 | P0AAC7 | Positive | 4453503 - 4454162 | 23325.3 |
| Sulfur transfer protein, dsrc | K7R23_21100 | Q8FJ69 | Positive | 4454253 - 4454582 | 12350.0 |
| acylphosphatase | K7R23_21105 | A8AIA9 | Negative | 4454579 - 4454860 | 10672.8 |
| Methyltransferase | K7R23_21110 | A8AIB0 | Positive | 4454955 - 4456145 | 44185.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

