Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | K7R23_01730 | Not Available | Negative | 390203 - 390832 | 23706.4 |
| Putative integrase | K7R23_01735 | A9B1E0 | Negative | 390833 - 392473 | 61666.2 |
| Attr | Not Available | Not Available | Positive | 392520 - 392531 | Not Available |
| Trna-gly; | Not Available | Not Available | Positive | 392590 - 392663 | Not Available |
| Lysozyme peptidase | K7R23_01745 | Q46798 | Negative | 392742 - 393491 | 26209.7 |
| isopentenyl-diphosphate delta-isomerase | K7R23_01750 | B5F5G3 | Positive | 393765 - 394310 | 20419.1 |
| Attl | Not Available | Not Available | Positive | 394311 - 394326 | Not Available |
| lysine--trna ligase | K7R23_01755 | A8AP96 | Negative | 394388 - 395905 | 57486.6 |
| Peptide chain release factor 1 | K7R23_01760 | B7UHU0 | Negative | 395915 - 397013 | 41252.1 |
| Recj | K7R23_01765 | P21893 | Negative | 397105 - 398838 | 63025.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

