Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K7R23_21030 | Not Available | Positive | 4444665 - 4444794 | 4690.75 |
| Integrase protein | K7R23_21035 | Not Available | Positive | 4444760 - 4445068 | 11677.8 |
| Attl | Not Available | Not Available | Positive | 4445152 - 4445221 | Not Available |
| Hypothetical protein | K7R23_21040 | Not Available | Negative | 4445449 - 4445823 | 13739.2 |
| Putative endolysin | K7R23_21045 | O64362 | Negative | 4445820 - 4446359 | 19452.5 |
| Hypothetical protein | K7R23_21050 | Not Available | Negative | 4446340 - 4446569 | 7632.32 |
| O-acetyltransferase | K7R23_21055 | P37669 | Positive | 4446745 - 4447743 | 38413.9 |
| hypothetical protein | K7R23_21060 | Not Available | Negative | 4447775 - 4448299 | 19311.1 |
| Tail fiber protein | K7R23_21065 | Q9XJP3 | Negative | 4448346 - 4449401 | 38745.7 |
| Truncated transposase | K7R23_21070 | P0CF49 | Positive | 4449476 - 4450153 | 25237.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

