Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | K7R23_18050 | Not Available | Positive | 3830773 - 3831357 | 21094.2 |
| Tail fiber protein | K7R23_18055 | Not Available | Positive | 3831437 - 3831619 | 6843.34 |
| Hypothetical protein | K7R23_18060 | B7UNX3 | Positive | 3832027 - 3832227 | 7923.29 |
| Attr | Not Available | Not Available | Positive | 3834578 - 3834589 | Not Available |
| Attl | Not Available | Not Available | Positive | 4440960 - 4440972 | Not Available |
| Integrase protein | K7R23_21010 | Not Available | Positive | 4441746 - 4442006 | 10057.0 |
| Attl | Not Available | Not Available | Positive | 4442141 - 4442155 | Not Available |
| Hypothetical protein | K7R23_21015 | O34569 | Negative | 4442282 - 4442782 | 19071.9 |
| hypothetical protein | K7R23_21020 | Not Available | Negative | 4442793 - 4443713 | 35089.6 |
| crp/fnr family transcriptional regulator | K7R23_21025 | Q9C1C2 | Negative | 4443781 - 4444401 | 23762.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

