Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gpe family tail protein | K7R23_16375 | O64312 | Negative | 3494323 - 3494478 | 5743.69 |
| Tail e family protein | K7R23_16380 | O64313 | Negative | 3494487 - 3494861 | 13480.2 |
| Major tail tube protein | K7R23_16385 | P85988 | Negative | 3494917 - 3495429 | 18795.4 |
| Tail sheath family protein | K7R23_16390 | P85993 | Negative | 3495429 - 3496613 | 43512.5 |
| Gene d protein | K7R23_16395 | P21679 | Positive | 3496771 - 3497793 | 37806.8 |
| Ogr/delta-like zinc finger family protein | K7R23_16400 | P37057 | Positive | 3497836 - 3498096 | 9678.37 |
| Hok/gef family protein | K7R23_16405 | P37305 | Positive | 3498288 - 3498428 | 5254.64 |
| Hypothetical protein | K7R23_16410 | C0H423 | Positive | 3498564 - 3498860 | 10871.3 |
| Com | K7R23_16415 | Q38200 | Positive | 3499053 - 3499250 | 7548.05 |
| Adenine dna methyltransferase | K7R23_16420 | P50178 | Positive | 3499195 - 3499986 | 28942.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

