Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Marr family transcriptional regulator | K7R23_16325 | Not Available | Positive | 3484689 - 3484934 | 8849.79 |
| Hypothetical protein | K7R23_16330 | Not Available | Positive | 3484931 - 3485230 | 11330.6 |
| Hypothetical protein | K7R23_16335 | Not Available | Positive | 3485242 - 3485445 | 7718.95 |
| Putative spfh domain protein | K7R23_16340 | Not Available | Positive | 3485442 - 3486272 | 30675.9 |
| Derepression protein | K7R23_16345 | Not Available | Positive | 3486641 - 3486871 | 9117.98 |
| Hypothetical protein | K7R23_16350 | Not Available | Positive | 3487177 - 3487542 | 13811.6 |
| Replication protein | K7R23_16355 | Q8Z1E1 | Positive | 3487549 - 3490341 | 106499.0 |
| Recombinase family protein | K7R23_16360 | P03015 | Positive | 3490400 - 3490999 | 22493.2 |
| Tail protein | K7R23_16365 | Not Available | Negative | 3491028 - 3491516 | 18409.0 |
| Tail tape measure protein | K7R23_16370 | O64314 | Negative | 3491529 - 3494336 | 99786.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

