Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 2905949 - 2905961 | Not Available |
| Attl | Not Available | Not Available | Positive | 3481069 - 3481080 | Not Available |
| Integrase | K7R23_16285 | P36932 | Negative | 3481235 - 3482215 | 37309.3 |
| Hypothetical protein | K7R23_16290 | P04132 | Negative | 3482282 - 3482605 | 11926.3 |
| Hypothetical protein | K7R23_16295 | Not Available | Positive | 3482949 - 3483299 | 13167.4 |
| Hypothetical protein | K7R23_16300 | Not Available | Positive | 3483310 - 3483597 | 10544.5 |
| Dna modification methyltransferase | K7R23_16305 | Not Available | Positive | 3483609 - 3483851 | 8971.61 |
| Membrane protein | K7R23_16310 | Not Available | Positive | 3483848 - 3483961 | 4223.47 |
| hypothetical protein | K7R23_16315 | Not Available | Positive | 3484055 - 3484465 | 14992.1 |
| Hypothetical protein | K7R23_16320 | Not Available | Positive | 3484489 - 3484692 | 8080.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

