Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ssra-binding protein | K7R23_13500 | A8ANF2 | Negative | 2885327 - 2885809 | 18224.0 |
| Type ii toxin-antitoxin system toxin rata | K7R23_13505 | P0AGL5 | Positive | 2885980 - 2886417 | 16204.6 |
| Rnfh family protein | K7R23_13510 | B5F298 | Positive | 2886407 - 2886697 | 10730.0 |
| Outer membrane protein assembly factor bame | K7R23_13515 | P0A938 | Negative | 2886821 - 2887165 | 12533.1 |
| Dna repair protein recn | K7R23_13520 | P05824 | Negative | 2887315 - 2888976 | 61509.2 |
| Dna repair protein recn | K7R23_13525 | B7UH63 | Negative | 2889062 - 2889940 | 32510.1 |
| Heat shock protein | K7R23_13530 | A7ZQ54 | Positive | 2890063 - 2890656 | 21837.1 |
| Hlyc/corc family transporter | K7R23_13535 | P37908 | Negative | 2890713 - 2891999 | 47945.0 |
| Inner membrane protein ypjd | K7R23_13540 | P64434 | Negative | 2892091 - 2892882 | 29291.8 |
| Signal recognition particle protein | K7R23_13545 | P0AGD9 | Positive | 2893048 - 2894409 | 49816.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

