Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Serine acetyltransferase | K7R23_13455 | Q42588 | Negative | 2865090 - 2865641 | 21243.9 |
| Hypothetical protein | K7R23_13460 | P51716 | Negative | 2865669 - 2866079 | 14860.6 |
| Hypothetical protein | K7R23_13465 | Not Available | Negative | 2866103 - 2866282 | 6645.24 |
| Hypothetical protein | K7R23_13470 | P0DUE5 | Negative | 2866385 - 2866630 | 9307.15 |
| Attr | Not Available | Not Available | Positive | 2866901 - 2866924 | Not Available |
| Tmrna,resume; | Not Available | Not Available | Positive | 2866900 - 2867264 | Not Available |
| hlyd family efflux transporter periplasmic adaptor subunit | K7R23_13480 | Q7ANN5 | Negative | 2867336 - 2868499 | 42977.8 |
| Abc transporter | K7R23_13485 | P0DKX6 | Negative | 2868507 - 2870273 | 64898.0 |
| tolc family outer membrane protein | K7R23_13490 | Q8G0Y6 | Negative | 2870270 - 2871676 | 51772.8 |
| Hypothetical protein | K7R23_13495 | P50899 | Negative | 2871759 - 2884709 | 429753.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

