Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna restriction methylase | K7R23_01680 | Not Available | Positive | 380429 - 381271 | 32592.2 |
| Prophage p4 integrase | K7R23_01685 | P08320 | Positive | 381545 - 382147 | 21694.2 |
| Integrase | K7R23_01690 | Not Available | Negative | 382143 - 382470 | 11183.5 |
| Dna binding protein ner | K7R23_01695 | P0ACH3 | Negative | 382709 - 382897 | 6794.33 |
| hypothetical protein | K7R23_01700 | Not Available | Negative | 382920 - 383342 | 15057.3 |
| aaa family atpase | K7R23_01705 | Not Available | Positive | 383781 - 385479 | 64308.1 |
| hypothetical protein | K7R23_01710 | Not Available | Positive | 386026 - 386307 | 10262.1 |
| hypothetical protein | K7R23_01715 | Not Available | Negative | 386410 - 386715 | 11220.6 |
| Putative resolvase | K7R23_01720 | P04130 | Negative | 387430 - 387999 | 21028.6 |
| hypothetical protein | K7R23_01725 | Not Available | Negative | 388648 - 388944 | 10535.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

