Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage-tail assembly-like protein | K7R23_13305 | O64363 | Positive | 2841597 - 2842151 | 20059.7 |
| Hypothetical protein | K7R23_13310 | Not Available | Positive | 2842132 - 2842320 | 6897.63 |
| Structural protein | K7R23_13315 | Not Available | Positive | 2842631 - 2843233 | 21881.1 |
| Pmgp | K7R23_13320 | Not Available | Positive | 2843140 - 2843760 | 22171.3 |
| Hdmd | K7R23_13325 | Not Available | Positive | 2843750 - 2844415 | 25008.0 |
| Minor tail protein | K7R23_13330 | Not Available | Positive | 2844426 - 2845067 | 23736.2 |
| rna polymerase subunit sigma-70 | K7R23_13335 | Not Available | Positive | 2845238 - 2845843 | 22488.3 |
| Terminase large subunit | K7R23_13340 | P36693 | Positive | 2845833 - 2847788 | 72935.4 |
| phage head-tail adapter protein | K7R23_13345 | Not Available | Positive | 2847797 - 2848060 | 9622.56 |
| Portal protein | K7R23_13350 | P03710 | Positive | 2848060 - 2849703 | 61468.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

