Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4222 domain-containing protein | K7R23_13255 | Not Available | Positive | 2833660 - 2833839 | 7049.47 |
| Replication protein | K7R23_13260 | P75978 | Positive | 2833836 - 2834708 | 31757.1 |
| Putative dna methyltransferase | K7R23_13265 | P76509 | Positive | 2834705 - 2835586 | 32655.0 |
| Putative methylase | K7R23_13270 | P34882 | Positive | 2835579 - 2837306 | 62742.9 |
| Hypothetical protein | K7R23_13275 | P76162 | Positive | 2837303 - 2838370 | 40558.1 |
| Putative antitermination protein q | K7R23_13280 | P13870 | Positive | 2838392 - 2839087 | 26639.0 |
| Hypothetical protein | K7R23_13285 | Not Available | Positive | 2839286 - 2839477 | 7089.52 |
| Hypothetical protein | K7R23_13290 | P28638 | Positive | 2839627 - 2840679 | 40126.0 |
| Holin | K7R23_13295 | Not Available | Positive | 2840857 - 2841189 | 11609.4 |
| Virion protein | K7R23_13300 | Q9XJR2 | Positive | 2841186 - 2841593 | 15406.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

