Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K7R23_13205 | Not Available | Negative | 2827735 - 2828061 | 12010.0 |
| Hypothetical protein | K7R23_13210 | Not Available | Negative | 2828058 - 2828258 | 7275.91 |
| Hypothetical protein | K7R23_13215 | P76514 | Negative | 2828243 - 2828785 | 20364.4 |
| Hypothetical protein | K7R23_13220 | P76513 | Negative | 2828924 - 2829751 | 30684.1 |
| Hypothetical protein | K7R23_13225 | P76512 | Negative | 2829808 - 2830179 | 13389.0 |
| Ci repressor | K7R23_13230 | P18680 | Negative | 2831172 - 2831867 | 25673.4 |
| Putative antirepressor cro | K7R23_13235 | O85264 | Positive | 2831966 - 2832229 | 9700.68 |
| Hypothetical protein | K7R23_13240 | P75976 | Positive | 2832222 - 2832779 | 20573.2 |
| Hypothetical protein | K7R23_13245 | P75977 | Positive | 2832776 - 2832973 | 6997.2 |
| Uncharacterized phage-encoded protein | K7R23_13250 | P19653 | Positive | 2832954 - 2833658 | 25816.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

