Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Transposase insf | K7R23_13160 | P0CF79 | Negative | 2820164 - 2821299 | 43703.7 |
| Cp4-57 prophage | K7R23_13165 | P32053 | Negative | 2821449 - 2821814 | 14047.9 |
| Attl | Not Available | Not Available | Positive | 2821994 - 2822017 | Not Available |
| Cytosine-specific dna methyltransferase | K7R23_13170 | Not Available | Negative | 2822118 - 2822999 | 33663.6 |
| aaa family atpase | K7R23_13175 | P0DW41 | Negative | 2823079 - 2824812 | 65179.2 |
| Putative integrase | K7R23_13180 | P76056 | Negative | 2824870 - 2826036 | 43641.6 |
| Putative excisionase | K7R23_13185 | Not Available | Negative | 2825997 - 2826203 | 7786.36 |
| Putative exonuclease | K7R23_13190 | P04536 | Negative | 2826246 - 2826813 | 20915.8 |
| hypothetical protein | K7R23_13195 | Not Available | Negative | 2826813 - 2827010 | 7773.4 |
| Dna methyltransferase | K7R23_13200 | P23192 | Negative | 2827007 - 2827738 | 27328.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

