Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber assembly protein | K7R23_08175 | Q71TD6 | Negative | 1749316 - 1749843 | 20429.8 |
| Tail fiber protein sc | K7R23_08180 | P26700 | Negative | 1749847 - 1750683 | 30689.6 |
| Recombinase family protein | K7R23_08185 | P03015 | Positive | 1750788 - 1751387 | 22493.2 |
| Tail protein | K7R23_08190 | Not Available | Negative | 1751416 - 1751904 | 18409.0 |
| Tail tape measure protein | K7R23_08195 | O64314 | Negative | 1751917 - 1754724 | 99786.0 |
| Gpe family tail protein | K7R23_08200 | O64312 | Negative | 1754711 - 1754866 | 5743.69 |
| Tail e family protein | K7R23_08205 | O64313 | Negative | 1754875 - 1755249 | 13480.2 |
| Major tail tube protein | K7R23_08210 | P85988 | Negative | 1755305 - 1755817 | 18795.4 |
| Tail sheath family protein | K7R23_08215 | P85993 | Negative | 1755817 - 1757001 | 43512.5 |
| Bacteriop2 gpd protein | K7R23_08220 | P21679 | Positive | 1757159 - 1758268 | 41312.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

