Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Endolysin | K7R23_08125 | Not Available | Positive | 1742365 - 1742910 | 20365.2 |
| Duf2570 domain-containing protein | K7R23_08130 | Not Available | Positive | 1742907 - 1743314 | 14895.4 |
| Tail completion protein | K7R23_08135 | P36933 | Positive | 1743452 - 1743919 | 17755.8 |
| Tail protein | K7R23_08140 | P36934 | Positive | 1743912 - 1744547 | 24719.4 |
| Baseplate assembly protein v | K7R23_08145 | P31340 | Positive | 1744559 - 1745125 | 19605.3 |
| Lysozyme family baseplate assembly protein | K7R23_08150 | P51768 | Positive | 1745143 - 1745472 | 12082.7 |
| Baseplate j/gp47 family protein | K7R23_08155 | P51767 | Positive | 1745476 - 1746372 | 31829.6 |
| Tail protein i | K7R23_08160 | P26701 | Positive | 1746365 - 1746895 | 19888.7 |
| Tail fiber protein | K7R23_08165 | P26700 | Positive | 1746898 - 1748751 | 64858.9 |
| Tail fiber assembly protein | K7R23_08170 | P0DJY5 | Positive | 1748754 - 1749287 | 20729.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

