Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Chromosome partitioning protein | K7R23_08075 | Not Available | Positive | 1733865 - 1734176 | 11264.5 |
| duf4760 domain-containing protein | K7R23_08080 | Not Available | Negative | 1734267 - 1734764 | 19474.6 |
| Pbsx family portal protein | K7R23_08085 | P25480 | Negative | 1735477 - 1736523 | 39273.1 |
| Helix-turn-helix domain-containing protein | K7R23_08090 | P25479 | Negative | 1736523 - 1738274 | 66817.4 |
| Capsid scaffolding protein | K7R23_08095 | P25478 | Positive | 1738429 - 1739265 | 30637.9 |
| Major capsid protein, p2 family | K7R23_08100 | P85990 | Positive | 1739289 - 1740341 | 39198.4 |
| Small terminase subunit | K7R23_08105 | P25476 | Positive | 1740387 - 1741187 | 28948.7 |
| Head completion/stabilization protein | K7R23_08110 | P25475 | Positive | 1741290 - 1741784 | 18432.6 |
| Tail protein x | K7R23_08115 | P51772 | Positive | 1741784 - 1741984 | 7465.94 |
| Holin | K7R23_08120 | Not Available | Positive | 1741987 - 1742310 | 11205.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

