Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | K7R23_03500 | P16918 | Negative | 767301 - 770431 | 111293.0 |
| duf6531 domain-containing protein | K7R23_03505 | P16918 | Negative | 770578 - 771438 | 30639.6 |
| barstar family protein | K7R23_03510 | P64618 | Negative | 771590 - 771862 | 10914.9 |
| nad-dependent succinate-semialdehyde dehydrogenase | K7R23_03515 | P0DOV9 | Negative | 771890 - 773338 | 51565.7 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | K7R23_03520 | A8AQD4 | Negative | 773426 - 775393 | 73562.7 |
| p-hydroxybenzoic acid efflux pump subunit aaea | K7R23_03525 | A8AQD5 | Negative | 775399 - 776331 | 34788.5 |
| aaex family protein | K7R23_03530 | B7UJX4 | Negative | 776339 - 776542 | 7847.01 |
| hth-type transcriptional activator aaer | K7R23_03535 | P67664 | Positive | 776722 - 777651 | 34460.0 |
| metalloprotease tldd | K7R23_03540 | P0AGG9 | Negative | 777856 - 779301 | 51215.0 |
| asma2 domain-containing protein yhdp | K7R23_03545 | P46474 | Negative | 779441 - 783241 | 138803.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

