Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | K7R23_03400 | A8AQB4 | Negative | 749029 - 750519 | 53542.4 |
| n-acetylneuraminate lyase | K7R23_03405 | A8AQB6 | Negative | 750614 - 751507 | 32511.2 |
| transcriptional regulator nanr | K7R23_03410 | D2TP58 | Negative | 751628 - 752410 | 29213.8 |
| clpxp protease specificity-enhancing factor | K7R23_03415 | P0AFZ4 | Negative | 752531 - 753031 | 18222.3 |
| stringent starvation protein a | K7R23_03420 | P0ACA5 | Negative | 753037 - 753675 | 24234.2 |
| 30s ribosomal protein s9 | K7R23_03425 | A8AQC0 | Negative | 753978 - 754370 | 14857.1 |
| 50s ribosomal protein l13 | K7R23_03430 | A8AQC1 | Negative | 754386 - 754814 | 15990.5 |
| afg1 family atpase | K7R23_03435 | P64613 | Negative | 755053 - 756174 | 42874.7 |
| duf1043 family protein | K7R23_03440 | P0ADW5 | Positive | 756368 - 756766 | 15005.8 |
| serine endoprotease degq | K7R23_03445 | P39099 | Positive | 756937 - 758304 | 47290.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

