Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent oxidoreductase | K7R23_03350 | P38105 | Positive | 734152 - 735171 | 36542.3 |
| mfs transporter | K7R23_03355 | O34456 | Positive | 735255 - 736538 | 46389.2 |
| tigr01212 family radical sam protein | K7R23_03360 | P0ADW7 | Negative | 736585 - 737502 | 34034.9 |
| glutamate synthase large subunit | K7R23_03365 | P09831 | Positive | 738189 - 742649 | 163445.0 |
| glutamate synthase small subunit | K7R23_03370 | P09832 | Positive | 742662 - 744080 | 51999.1 |
| cytosine permease | K7R23_03375 | P0AA83 | Positive | 744339 - 745589 | 43279.4 |
| cytosine deaminase | K7R23_03380 | P25524 | Positive | 745579 - 746859 | 47748.2 |
| yhch/yjgk/yial family protein | K7R23_03385 | P45424 | Negative | 746956 - 747423 | 17057.6 |
| n-acetylmannosamine kinase | K7R23_03390 | A8AQB2 | Negative | 747420 - 748295 | 29964.0 |
| n-acetylmannosamine-6-phosphate 2-epimerase | K7R23_03395 | A8A533 | Negative | 748292 - 748981 | 24154.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

