Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative zinc-containing alcohol dehydrogenase superfamily protein | K7R23_02940 | P0A9S4 | Positive | 654159 - 654755 | 21142.7 |
| Putative deor transcriptional regulator ygbi | K7R23_02945 | P15082 | Positive | 654866 - 655639 | 27505.1 |
| Attl | Not Available | Not Available | Positive | 1723666 - 1723677 | Not Available |
| Integrase | K7R23_07990 | P36932 | Negative | 1724002 - 1725006 | 38117.5 |
| C protein | K7R23_07995 | P04132 | Negative | 1725103 - 1725423 | 12099.4 |
| Regulatory protein cox | K7R23_08000 | P07695 | Positive | 1725539 - 1725826 | 10867.2 |
| hypothetical protein | K7R23_08005 | Not Available | Positive | 1725833 - 1726039 | 7483.54 |
| Hypothetical protein | K7R23_08010 | Not Available | Positive | 1726159 - 1726509 | 13145.3 |
| Hypothetical protein | K7R23_08015 | Not Available | Positive | 1726520 - 1726807 | 10561.5 |
| Dna modification methyltransferase | K7R23_08020 | Not Available | Positive | 1726819 - 1727061 | 8971.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Colitis | Causes | PMC7953738 |
| Intestinal colitis | Causes | PMC7953738 |
| Diarrhea | Causes | PMC8510533 |
| Colonic crypt hyperplasia (cch) | Causes | PMC8510533 |
| Diarrheal disease | Causes | PMC8510533 |

