Acidaminococcus fermentans VR4

Non-motile

Kingdom

Bacillati

Phylum

Bacillota

Class

Negativicutes

Order

Acidaminococcales

Family

Acidaminococcaceae

Genus

Acidaminococcus

Description

Acidaminococcus fermentans VR4 is a Gram-negative bacterium characterized by its mesophilic nature, thriving optimally at moderate temperatures. This organism is non-motile and exhibits a free-living biotic relationship, suggesting it does not depend on other organisms for its survival and can exist independently in various environments. A. fermentans VR4 has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various ecological niches. The organism has been cataloged under accession number CP085936.1, which provides a reference point for researchers interested in its genetic and functional characteristics. The traits of A. fermentans VR4 suggest its potential role in specific ecological contexts, particularly in environments where organic compounds are available for fermentation. The ability to thrive in mesophilic conditions indicates that it may be involved in nutrient cycling in temperate habitats, where organic matter breakdown is crucial. The free-living nature of this bacterium could also imply a role in the microbiome of certain ecosystems, contributing to the diversity and stability of microbial communities. Understanding the ecological roles of such organisms can provide insights into their contributions to nutrient dynamics and ecosystem health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassNegativicutes
OrderAcidaminococcales
FamilyAcidaminococcaceae
GenusAcidaminococcus
SpeciesAcidaminococcus fermentans
StrainVR4

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidaminococcus fermentans VR4, Complete Genome

Gene Summary

Adenine Count

517121 bp

Thymine Count

513156 bp

Guanine Count

652201 bp

Cytosine Count

650710 bp

Genome Length

2333188 bp

Protein-coding Genes

2119 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated endonuclease cas2LK430_10410Q9KFX8Negative2213187 - 221347710906.2
type i-c crispr-associated endonuclease cas1cLK430_10415Q8KDC4Negative2213482 - 221451339110.4
crispr-associated protein cas4LK430_10420Q8F1F5Negative2214510 - 221518426008.3
type i-c crispr-associated protein cas7/csd2LK430_10425D4GQN6Negative2215181 - 221607733914.5
type i-c crispr-associated protein cas8c/csd1LK430_10430Not AvailableNegative2216077 - 221785265724.5
type i-c crispr-associated protein cas5cLK430_10435Q65TW5Negative2217849 - 221850225034.1
crispr-associated helicase/endonuclease cas3LK430_10440Q57821Negative2218534 - 222072082138.2
helix-turn-helix domain-containing proteinLK430_10445Q7A224Negative2221370 - 222242240159.9
type ii toxin-antitoxin system rele/pare family toxinLK430_10450Not AvailableNegative2222439 - 222273511293.7
hypothetical proteinLK430_10455Q2YW63Negative2223147 - 222343710939.2

Displaying genes 2081 – 2090 of 2201 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.