Acidaminococcus sp. AM05-11

Gram-negative

Kingdom

Bacillati

Phylum

Bacillota

Class

Negativicutes

Order

Acidaminococcales

Family

Acidaminococcaceae

Genus

Acidaminococcus

Description

Acidaminococcus sp. AM05-11 is a Gram-negative bacterium characterized by its single replicon, indicating a streamlined genomic structure. This species is a member of the genus Acidaminococcus, which is known for its ability to thrive in anaerobic environments. The genomic data for Acidaminococcus sp. AM05-11 is accessible under the accession number QRMX00000000.1, which is crucial for researchers seeking to study its genetic makeup and potential applications. Gram-negative bacteria, such as Acidaminococcus sp. AM05-11, are recognized for their unique cell wall structure, which includes an outer membrane that can impact antibiotic susceptibility and interactions with the environment. The presence of a single replicon suggests that Acidaminococcus sp. AM05-11 may have a simplified replication process, which could facilitate faster growth rates or adaptability in its ecological niche. Biologically, Acidaminococcus sp. species are often involved in the fermentation of amino acids, contributing to the nitrogen cycle and influencing the microbial community structure in their habitats. Understanding the specific traits of Acidaminococcus sp. AM05-11 can provide insights into its role in anaerobic ecosystems, potentially impacting soil health and nutrient cycling processes. Therefore, studying this bacterium may reveal its contributions to ecological balance and the functionality of microbial communities in various environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassNegativicutes
OrderAcidaminococcales
FamilyAcidaminococcaceae
GenusAcidaminococcus
SpeciesAcidaminococcus sp. AM05-11
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidaminococcus sp. AM05-11 AM05-11.Scaf75, whole genome shotgun

Gene Summary

Adenine Count

607059 bp

Thymine Count

607424 bp

Guanine Count

692652 bp

Cytosine Count

692488 bp

Genome Length

2599783 bp

Protein-coding Genes

2152 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive11 - 1568Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive98 - 195Not Available
hypothetical proteinDW089_00005Not AvailableNegative66 - 50616836.4
dna gyrase subunit aDW089_00010Not AvailableNegative929 - 342792506.7
hypothetical proteinDW089_00015Not AvailableNegative3477 - 424727559.7
thiamine diphosphokinaseDW089_00020Not AvailableNegative4251 - 494624763.7
Ncrna_class:otherNot AvailableNot AvailablePositive6697 - 6879Not Available
dna topoisomerase (atp-hydrolyzing) subunit bDW089_00025Not AvailableNegative4954 - 689472139.0
duf370 domain-containing proteinDW089_00030Not AvailableNegative6915 - 71428751.68
duf721 domain-containing proteinDW089_00035Not AvailableNegative7120 - 785428248.4

Displaying genes 1 – 10 of 1672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.