Acidaminococcus fermentans VR4

Non-motile

Kingdom

Bacillati

Phylum

Bacillota

Class

Negativicutes

Order

Acidaminococcales

Family

Acidaminococcaceae

Genus

Acidaminococcus

Description

Acidaminococcus fermentans VR4 is a Gram-negative bacterium characterized by its mesophilic nature, thriving optimally at moderate temperatures. This organism is non-motile and exhibits a free-living biotic relationship, suggesting it does not depend on other organisms for its survival and can exist independently in various environments. A. fermentans VR4 has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various ecological niches. The organism has been cataloged under accession number CP085936.1, which provides a reference point for researchers interested in its genetic and functional characteristics. The traits of A. fermentans VR4 suggest its potential role in specific ecological contexts, particularly in environments where organic compounds are available for fermentation. The ability to thrive in mesophilic conditions indicates that it may be involved in nutrient cycling in temperate habitats, where organic matter breakdown is crucial. The free-living nature of this bacterium could also imply a role in the microbiome of certain ecosystems, contributing to the diversity and stability of microbial communities. Understanding the ecological roles of such organisms can provide insights into their contributions to nutrient dynamics and ecosystem health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassNegativicutes
OrderAcidaminococcales
FamilyAcidaminococcaceae
GenusAcidaminococcus
SpeciesAcidaminococcus fermentans
StrainVR4

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidaminococcus fermentans VR4, Complete Genome

Gene Summary

Adenine Count

517121 bp

Thymine Count

513156 bp

Guanine Count

652201 bp

Cytosine Count

650710 bp

Genome Length

2333188 bp

Protein-coding Genes

2119 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabLK430_08110A3DDI9Positive1750718 - 175204650400.2
dna mismatch repair protein mutsLK430_08115A3DDI3Positive1752043 - 175465297760.8
dna mismatch repair endonuclease mutlLK430_08120A4J5Q3Positive1754652 - 175664072227.6
class i sam-dependent methyltransferaseLK430_08125P54171Positive1756659 - 175745329261.5
trna (adenosine(37)-n6)-dimethylallyltransferase miaaLK430_08130Q3ACA8Positive1757450 - 175840035644.1
rna chaperone hfqLK430_08135O31796Positive1758493 - 175876210040.2
site-specific tyrosine recombinase xerdLK430_08140Q8Y5V0Positive1758746 - 175964234206.8
zinc metalloprotease htpxLK430_08145Q2T2A9Positive1759657 - 176051731141.2
sodium:glutamate symporterLK430_08150P0AER8Positive1760854 - 176206843018.9
anaerobic ribonucleoside-triphosphate reductase activating proteinLK430_08155Q58624Positive1762266 - 176297626122.6

Displaying genes 1621 – 1630 of 2201 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.