Dickeya poaceiphila

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya poaceiphila is a rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This bacterium is notable for its genetic complexity, possessing a total of seven replicons. The presence of multiple replicons can indicate a diverse genetic repertoire, potentially contributing to its adaptability in various environments. The genomic data for Dickeya poaceiphila encompasses several accessions, including CP042220.2, CM001975.1, AOOD01000059.1, AOOD01000060.1, AOOD01000061.1, AOOD01000062.1, and AOOD01000063.1. These accessions represent different genomic sequences that provide insights into the bacterium's genetic makeup and evolutionary history. Ecologically, Dickeya poaceiphila is significant as it is known to be associated with plants, particularly in agricultural settings. Its motility, facilitated by flagella, may play a crucial role in its ability to colonize plant surfaces and potentially contribute to its pathogenicity. Understanding the traits of Dickeya poaceiphila, including its rod shape, flagella, and genetic structure, can aid in the development of management strategies for diseases it may cause in plants, thus highlighting the importance of studying its biological and ecological roles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya poaceiphila
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Poaceae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1020949 bp

Thymine Count

1019894 bp

Guanine Count

1141901 bp

Cytosine Count

1134410 bp

Genome Length

4317154 bp

Protein-coding Genes

3640 genes

Non-Coding Genes

293 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s20Dpoa569_0000568C6DF06Negative630889 - 6311529822.03
bifunctional riboflavin kinase/fad synthetaseDpoa569_0000569P0AG42Positive631549 - 63249034162.5
isoleucine--trna ligaseDpoa569_0000570C6DF04Positive632525 - 635350104700.0
lipoprotein signal peptidaseDpoa569_0000571Q2NVY5Positive635350 - 63585618567.7
fkbp-type peptidyl-prolyl cis-trans isomeraseDpoa569_0000572P0AEM2Positive635860 - 63631816348.4
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseDpoa569_0000573Q6D0C6Positive636315 - 63726534584.4
ribonucleoside hydrolase rihcDpoa569_0000574B4TWP3Positive637337 - 63825432771.9
4-hydroxy-tetrahydrodipicolinate reductaseDpoa569_0000575A8ALS4Positive638462 - 63928328724.4
hypothetical proteinDpoa569_0000576Not AvailablePositive639335 - 6395778804.19
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitDpoa569_0000577Q6D0C8Positive639737 - 64088541480.4

Displaying genes 791 – 800 of 7804 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.