Dickeya poaceiphila

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya poaceiphila is a rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This bacterium is notable for its genetic complexity, possessing a total of seven replicons. The presence of multiple replicons can indicate a diverse genetic repertoire, potentially contributing to its adaptability in various environments. The genomic data for Dickeya poaceiphila encompasses several accessions, including CP042220.2, CM001975.1, AOOD01000059.1, AOOD01000060.1, AOOD01000061.1, AOOD01000062.1, and AOOD01000063.1. These accessions represent different genomic sequences that provide insights into the bacterium's genetic makeup and evolutionary history. Ecologically, Dickeya poaceiphila is significant as it is known to be associated with plants, particularly in agricultural settings. Its motility, facilitated by flagella, may play a crucial role in its ability to colonize plant surfaces and potentially contribute to its pathogenicity. Understanding the traits of Dickeya poaceiphila, including its rod shape, flagella, and genetic structure, can aid in the development of management strategies for diseases it may cause in plants, thus highlighting the importance of studying its biological and ecological roles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya poaceiphila
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Poaceae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

995305 bp

Thymine Count

996944 bp

Guanine Count

1105117 bp

Cytosine Count

1111566 bp

Genome Length

4214632 bp

Protein-coding Genes

3604 genes

Non-Coding Genes

267 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail fiber proteinDpoa569_0000163P26700Positive194419 - 19617061657.7
Tail fiber proteinDpoa569_0000164P26700Positive196539 - 19768440379.9
Tail fiber proteinDpoa569_0000165P26700Positive198028 - 19920640922.0
Tail fiber assembly proteinDpoa569_0000166P77656Positive199208 - 19964216097.1
Tail fiber proteinDpoa569_0000167P26700Positive199925 - 20094136597.7
Tail fiber assembly proteinDpoa569_0000168P03740Positive200941 - 20156123143.9
Phage tail collar domain proteinDpoa569_0000169P26700Positive201854 - 20321245702.0
Tail fiber assembly proteinDpoa569_0000170P09154Positive203209 - 20360414618.3
Nudix hydrolaseDpoa569_0000171Q75UV1Negative203576 - 20405518388.7
AttlNot AvailableNot AvailablePositive1455833 - 1455844Not Available

Displaying genes 1 – 10 of 7804 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.