Dickeya poaceiphila

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya poaceiphila is a rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This bacterium is notable for its genetic complexity, possessing a total of seven replicons. The presence of multiple replicons can indicate a diverse genetic repertoire, potentially contributing to its adaptability in various environments. The genomic data for Dickeya poaceiphila encompasses several accessions, including CP042220.2, CM001975.1, AOOD01000059.1, AOOD01000060.1, AOOD01000061.1, AOOD01000062.1, and AOOD01000063.1. These accessions represent different genomic sequences that provide insights into the bacterium's genetic makeup and evolutionary history. Ecologically, Dickeya poaceiphila is significant as it is known to be associated with plants, particularly in agricultural settings. Its motility, facilitated by flagella, may play a crucial role in its ability to colonize plant surfaces and potentially contribute to its pathogenicity. Understanding the traits of Dickeya poaceiphila, including its rod shape, flagella, and genetic structure, can aid in the development of management strategies for diseases it may cause in plants, thus highlighting the importance of studying its biological and ecological roles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya poaceiphila
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Poaceae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1020949 bp

Thymine Count

1019894 bp

Guanine Count

1141901 bp

Cytosine Count

1134410 bp

Genome Length

4317154 bp

Protein-coding Genes

3640 genes

Non-Coding Genes

293 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
envelope stress sensor histidine kinase cpxaDpoa569_0000159P0AE84Negative190556 - 19192651466.0
envelope stress response regulator transcription factor cpxrDpoa569_0000160P0AE89Negative191943 - 19264126380.9
stress resistance proteinDpoa569_0000161P0AE86Positive192826 - 19338621129.1
hypothetical proteinDpoa569_0000162Not AvailableNegative193568 - 19405618776.1
oxidoreductase fes-binding subunitDpoa569_0000172Not AvailablePositive204140 - 2042444292.32
cdf family cation-efflux transporter fiefDpoa569_0000173C6DHK1Positive204373 - 20527532920.2
6-phosphofructokinaseDpoa569_0000174C6DHK2Positive205473 - 20643534848.9
n-carbamoylputrescine amidaseDpoa569_0000175Q9XGI9Positive206747 - 20763132627.7
agmatine deiminaseDpoa569_0000176Q6CZ80Positive207636 - 20873640180.4
alkaline phosphataseDpoa569_0000177P19147Negative208866 - 21026949140.1

Displaying genes 391 – 400 of 7804 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.