Dickeya poaceiphila

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya poaceiphila is a rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This bacterium is notable for its genetic complexity, possessing a total of seven replicons. The presence of multiple replicons can indicate a diverse genetic repertoire, potentially contributing to its adaptability in various environments. The genomic data for Dickeya poaceiphila encompasses several accessions, including CP042220.2, CM001975.1, AOOD01000059.1, AOOD01000060.1, AOOD01000061.1, AOOD01000062.1, and AOOD01000063.1. These accessions represent different genomic sequences that provide insights into the bacterium's genetic makeup and evolutionary history. Ecologically, Dickeya poaceiphila is significant as it is known to be associated with plants, particularly in agricultural settings. Its motility, facilitated by flagella, may play a crucial role in its ability to colonize plant surfaces and potentially contribute to its pathogenicity. Understanding the traits of Dickeya poaceiphila, including its rod shape, flagella, and genetic structure, can aid in the development of management strategies for diseases it may cause in plants, thus highlighting the importance of studying its biological and ecological roles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya poaceiphila
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Poaceae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1020949 bp

Thymine Count

1019894 bp

Guanine Count

1141901 bp

Cytosine Count

1134410 bp

Genome Length

4317154 bp

Protein-coding Genes

3640 genes

Non-Coding Genes

293 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
malate/lactate/ureidoglycolate dehydrogenaseDpoa569_0002405P30178Negative2669228 - 267025036722.0
abc transporter substrate-binding proteinDpoa569_0002406Not AvailablePositive2670636 - 267161635540.2
abc transporter atp-binding proteinDpoa569_0002407Q2K164Positive2671633 - 267249031696.3
abc transporter permeaseDpoa569_0002408Q57856Positive2672450 - 267331631783.9
glutamate/aspartate:proton symporter gltpDpoa569_0002409P21345Negative2673712 - 267502847287.2
hth-type transcriptional regulator cblDpoa569_0002410Q47083Negative2675466 - 267641935680.8
hydrogenase maturation factor hybgDpoa569_0002411P20927Negative2676715 - 267699010133.0
4fe-4s dicluster domain-containing proteinDpoa569_0002412P23481Positive2677400 - 267802622351.8
hydrogenase 4 subunit bDpoa569_0002413P23482Positive2678023 - 268006272601.0
respiratory chain complex i subunit 1 family proteinDpoa569_0002414P77858Positive2680074 - 268102133422.1

Displaying genes 2441 – 2450 of 7804 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.