Dickeya poaceiphila

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya poaceiphila is a rod-shaped bacterium characterized by the presence of flagella, which facilitate its motility. This bacterium is notable for its genetic complexity, possessing a total of seven replicons. The presence of multiple replicons can indicate a diverse genetic repertoire, potentially contributing to its adaptability in various environments. The genomic data for Dickeya poaceiphila encompasses several accessions, including CP042220.2, CM001975.1, AOOD01000059.1, AOOD01000060.1, AOOD01000061.1, AOOD01000062.1, and AOOD01000063.1. These accessions represent different genomic sequences that provide insights into the bacterium's genetic makeup and evolutionary history. Ecologically, Dickeya poaceiphila is significant as it is known to be associated with plants, particularly in agricultural settings. Its motility, facilitated by flagella, may play a crucial role in its ability to colonize plant surfaces and potentially contribute to its pathogenicity. Understanding the traits of Dickeya poaceiphila, including its rod shape, flagella, and genetic structure, can aid in the development of management strategies for diseases it may cause in plants, thus highlighting the importance of studying its biological and ecological roles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya poaceiphila
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Poaceae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1020949 bp

Thymine Count

1019894 bp

Guanine Count

1141901 bp

Cytosine Count

1134410 bp

Genome Length

4317154 bp

Protein-coding Genes

3640 genes

Non-Coding Genes

293 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ycik family oxidoreductaseDpoa569_0001975P31808Positive2197408 - 219816927897.8
cob(i)yrinic acid a,c-diamide adenosyltransferaseDpoa569_0001976P0A9H6Positive2198203 - 219879322038.3
23s rrna pseudouridine(2605) synthase rlubDpoa569_0001977P59815Negative2198858 - 219974833607.5
threonylcarbamoyl-amp synthaseDpoa569_0001978P0AFR5Negative2199938 - 220055823082.9
php domain-containing proteinDpoa569_0001979P77766Negative2200650 - 220152231893.3
hypothetical proteinDpoa569_0001980Not AvailableNegative2201740 - 22019437702.4
anthranilate synthase component 1Dpoa569_0001981P00897Positive2201942 - 220350458019.2
glutamine amidotransferaseDpoa569_0001982Q8ZEG6Positive2203504 - 220408220810.3
anthranilate phosphoribosyltransferaseDpoa569_0001983C6DGZ7Positive2204084 - 220510036160.5
bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpfDpoa569_0001984P00910Positive2205106 - 220649149995.8

Displaying genes 2011 – 2020 of 7804 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.