Polynucleobacter difficilis AM-8B5

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Polynucleobacter

Description

Polynucleobacter difficilis AM-8B5 is a rod-shaped bacterium characterized by a single replicon. This species is part of the Polynucleobacter genus, which is known for its ecological roles in freshwater environments. The specific accession number for Polynucleobacter difficilis AM-8B5 is CP023276.1, providing a reference for genetic and genomic studies. The rod shape of P. difficilis AM-8B5 suggests a morphology that may contribute to its adaptability in various aquatic habitats. The presence of a single replicon indicates a streamlined genomic organization, which can be advantageous for efficient replication and resource utilization in competitive environments. Ecologically, members of the Polynucleobacter genus, including P. difficilis, are often found in lakes and ponds, where they play significant roles in nutrient cycling and microbial community dynamics. Their existence in these ecosystems highlights their importance in maintaining the balance of aquatic environments. The traits of P. difficilis, particularly its shape and genomic structure, suggest it may have specialized adaptations that allow it to thrive in diverse conditions. This adaptability underscores the significance of studying such microorganisms to understand their contributions to freshwater ecology and their potential responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPolynucleobacter
SpeciesPolynucleobacter difficilis
StrainAM-8B5

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polynucleobacter difficilis AM-8B5, Complete Genome

Gene Summary

Adenine Count

503172 bp

Thymine Count

504444 bp

Guanine Count

495869 bp

Cytosine Count

492044 bp

Genome Length

1995529 bp

Protein-coding Genes

1992 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical protein-A9AI97Positive41 - 148654068.7
hypothetical protein-Q9I7C4Positive1748 - 286340913.5
hypothetical protein-P22118Positive2875 - 537392396.5
hypothetical protein-P55200Positive5377 - 587118800.5
hypothetical protein-Not AvailablePositive5884 - 60937527.14
hypothetical protein-P0AD32Positive6135 - 692327939.7
hypothetical protein-A4SUS3Positive7026 - 893969406.8
hypothetical protein-A4SUS4Positive8936 - 959824175.3
hypothetical protein-P0A149Positive9614 - 1038427606.8
hypothetical protein-Q9JW77Positive10398 - 1128231237.2

Displaying genes 1 – 10 of 2033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.