Abiotrophia defectiva subsp. subspepi var. varfungi

microaerophile

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Aerococcaceae

Genus

Abiotrophia

Description

Abiotrophia defectiva subsp. subspepi var. varfungi is a microaerophilic bacterium primarily found in saliva. This organism exhibits a unique adaptation to low-oxygen environments, which allows it to thrive in the oral cavity where oxygen levels are often reduced compared to the atmosphere. Genetically, A. defectiva subsp. subspepi var. varfungi has two replicons, indicating a complex genomic structure that may contribute to its metabolic capabilities and resilience in its specific habitat. The organism is represented in genetic databases with the accessions CP146287.1 and CP053988.1, which provide sequences that researchers can use for further studies. The presence of A. defectiva subsp. subspepi var. varfungi in saliva suggests its potential role in oral microbiota. Given its microaerophilic nature, it may interact with other microbial species in the oral ecosystem, contributing to the balance of microbial populations. Understanding this bacterium's ecological role could provide insights into oral health and disease, as the oral cavity serves as a critical interface between the body and external environment. Further research into its interactions within the oral microbiome and its potential implications for human health is warranted.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyAerococcaceae
GenusAbiotrophia
SpeciesAbiotrophia defectiva
Strainsubsp. subspepi var. varfungi

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Abiotrophia defectiva subsp. subspepi var. varfungi
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsaliva
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Abiotrophia defectiva subsp. subspepi var. varfungi , Complete Genome

Gene Summary

Adenine Count

547131 bp

Thymine Count

540685 bp

Guanine Count

479650 bp

Cytosine Count

477676 bp

Genome Length

2045142 bp

Protein-coding Genes

1809 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide abc transporter substrate-binding proteinV7R82_05515A2RI74Negative1178768 - 118041460795.6
abc transporter permeaseV7R82_05520P0A4P0Negative1180608 - 118154334356.8
oligopeptide abc transporter permeaseV7R82_05525P0A4N7Negative1181557 - 118251936200.1
atp-binding cassette domain-containing proteinV7R82_05530P0A2V4Negative1182521 - 118348036646.7
abc transporter atp-binding proteinV7R82_05535P50980Negative1183480 - 118449037548.0
acyl carrier proteinV7R82_05540P63440Negative1184591 - 11848339259.92
phosphate acyltransferase plsxV7R82_05545B8ZJM1Negative1185315 - 118633435860.2
atp-dependent dna helicase recgV7R82_05550Q5HPW4Negative1186463 - 118849976473.5
dak2 domain-containing proteinV7R82_05555O34751Negative1188640 - 119031359611.5
asp23/gls24 family envelope stress response proteinV7R82_05560O34318Negative1190347 - 119070312958.6

Displaying genes 1171 – 1180 of 3820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.