Abiotrophia defectiva subsp. subspepi var. varfungi

microaerophile

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Aerococcaceae

Genus

Abiotrophia

Description

Abiotrophia defectiva subsp. subspepi var. varfungi is a microaerophilic bacterium primarily found in saliva. This organism exhibits a unique adaptation to low-oxygen environments, which allows it to thrive in the oral cavity where oxygen levels are often reduced compared to the atmosphere. Genetically, A. defectiva subsp. subspepi var. varfungi has two replicons, indicating a complex genomic structure that may contribute to its metabolic capabilities and resilience in its specific habitat. The organism is represented in genetic databases with the accessions CP146287.1 and CP053988.1, which provide sequences that researchers can use for further studies. The presence of A. defectiva subsp. subspepi var. varfungi in saliva suggests its potential role in oral microbiota. Given its microaerophilic nature, it may interact with other microbial species in the oral ecosystem, contributing to the balance of microbial populations. Understanding this bacterium's ecological role could provide insights into oral health and disease, as the oral cavity serves as a critical interface between the body and external environment. Further research into its interactions within the oral microbiome and its potential implications for human health is warranted.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyAerococcaceae
GenusAbiotrophia
SpeciesAbiotrophia defectiva
Strainsubsp. subspepi var. varfungi

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Abiotrophia defectiva subsp. subspepi var. varfungi
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsaliva
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Abiotrophia defectiva subsp. subspepi var. varfungi , Complete Genome

Gene Summary

Adenine Count

547096 bp

Thymine Count

537791 bp

Guanine Count

481722 bp

Cytosine Count

480217 bp

Genome Length

2046826 bp

Protein-coding Genes

1800 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative acetyltransferaseV7R82_07875O34569Negative1707846 - 170844522665.3
epoxyqueuosine reductase quehV7R82_07880A0A0H3JUG6Negative1708438 - 170923531050.8
AttlNot AvailableNot AvailablePositive1709271 - 1709329Not Available
hypothetical proteinV7R82_07885Not AvailableNegative1709396 - 171016629336.2
Hypothetical proteinV7R82_07890Not AvailableNegative1710132 - 17103598219.65
Putative n-acetylmuramoyl-l-alanine amidaseV7R82_07895O32083Negative1710931 - 171242455098.8
Putative holinV7R82_07900Not AvailableNegative1712424 - 17126638497.42
HolinV7R82_07905Not AvailableNegative1712676 - 171295710668.8
hypothetical proteinV7R82_07910Not AvailableNegative1713010 - 17132318019.69
hypothetical proteinV7R82_07915Not AvailableNegative1713284 - 171376617822.1

Displaying genes 1 – 10 of 3820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.