Flammeovirga kamogawensis YS10

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Flammeovirga kamogawensis YS10 is a Gram-negative, rod-shaped bacterium characterized by its unique genetic makeup, which includes four distinct replicons. This feature is notable as it may contribute to the organism's adaptability and genetic diversity. The specific accessions associated with Flammeovirga kamogawensis YS10 are CP076128.1, CP076129.1, CP076130.1, and CP076131.1, which represent the genomic data available for this strain. The Gram-negative classification of Flammeovirga kamogawensis YS10 indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic that can influence its interactions with the environment and other microorganisms. The rod shape may also play a role in its motility and ability to colonize various niches. Understanding the genetic structure of Flammeovirga kamogawensis YS10 through its replicons could provide insights into its metabolic capabilities and ecological roles. Given its Gram-negative nature and rod shape, it may be involved in specific biochemical processes in its habitat. This bacterium's traits suggest that it could play a significant role in nutrient cycling or other ecological functions in its environment, although further research would be necessary to clarify its specific contributions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga kamogawensis
StrainYS10

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga kamogawensis YS10, Complete Genome

Gene Summary

Adenine Count

1582506 bp

Thymine Count

1589502 bp

Guanine Count

749084 bp

Cytosine Count

746783 bp

Genome Length

4667875 bp

Protein-coding Genes

3671 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucosaminidase domain-containing proteinKM029_16905O32083Positive4178325 - 417884620001.7
s46 family peptidaseKM029_16910A6GWM2Negative4178909 - 418108982650.6
signal peptidase iKM029_16915P57347Negative4181194 - 418242347041.0
4-hydroxy-tetrahydrodipicolinate reductaseKM029_16920A0LZI4Negative4182449 - 418317426645.6
hypothetical proteinKM029_16925Not AvailableNegative4183183 - 418389327207.6
parb/repb/spo0j family partition proteinKM029_16930P0A151Negative4183893 - 418483135355.7
aaa family atpaseKM029_16935Q9K5N0Negative4184884 - 418566328484.7
polysaccharide deacetylase family proteinKM029_16940Q81AF4Negative4185745 - 418638625145.4
branched-chain amino acid transaminaseKM029_16945O86428Positive4186835 - 418773133566.4
dihydroxy-acid dehydrataseKM029_16950A6GWT7Positive4187765 - 418944759148.7

Displaying genes 3381 – 3390 of 4660 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.