Flammeovirga kamogawensis YS10

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Flammeovirga kamogawensis YS10 is a Gram-negative, rod-shaped bacterium characterized by its unique genetic makeup, which includes four distinct replicons. This feature is notable as it may contribute to the organism's adaptability and genetic diversity. The specific accessions associated with Flammeovirga kamogawensis YS10 are CP076128.1, CP076129.1, CP076130.1, and CP076131.1, which represent the genomic data available for this strain. The Gram-negative classification of Flammeovirga kamogawensis YS10 indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic that can influence its interactions with the environment and other microorganisms. The rod shape may also play a role in its motility and ability to colonize various niches. Understanding the genetic structure of Flammeovirga kamogawensis YS10 through its replicons could provide insights into its metabolic capabilities and ecological roles. Given its Gram-negative nature and rod shape, it may be involved in specific biochemical processes in its habitat. This bacterium's traits suggest that it could play a significant role in nutrient cycling or other ecological functions in its environment, although further research would be necessary to clarify its specific contributions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga kamogawensis
StrainYS10

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga kamogawensis YS10, Complete Genome

Gene Summary

Adenine Count

216614 bp

Thymine Count

216168 bp

Guanine Count

104033 bp

Cytosine Count

103166 bp

Genome Length

639981 bp

Protein-coding Genes

420 genes

Non-Coding Genes

4 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hamp domain-containing histidine kinaseKM029_00005P37894Positive1 - 185169867.3
is256 family transposaseKM029_00010P80011Positive1990 - 318646163.5
threonylcarbamoyl-amp synthaseKM029_00015Q9UYB2Negative3262 - 422134254.4
mfs transporterKM029_00020Not AvailableNegative4227 - 495827173.0
caspase family proteinKM029_00025Not AvailablePositive5044 - 675064394.9
hypothetical proteinKM029_00030Not AvailableNegative6937 - 71768977.23
rrf2 family transcriptional regulatorKM029_00035O68025Positive7374 - 781716433.1
m48 family metallopeptidaseKM029_00040P47154Negative7890 - 915246877.1
lyttr family dna-binding domain-containing proteinKM029_00045Q814J1Positive9268 - 997527457.4
uvrd-helicase domain-containing proteinKM029_00050B2A610Positive10055 - 13417128411.0

Displaying genes 1 – 10 of 4660 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.