Flammeovirga kamogawensis YS10

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flammeovirgaceae

Genus

Flammeovirga

Description

Flammeovirga kamogawensis YS10 is a Gram-negative, rod-shaped bacterium characterized by its unique genetic makeup, which includes four distinct replicons. This feature is notable as it may contribute to the organism's adaptability and genetic diversity. The specific accessions associated with Flammeovirga kamogawensis YS10 are CP076128.1, CP076129.1, CP076130.1, and CP076131.1, which represent the genomic data available for this strain. The Gram-negative classification of Flammeovirga kamogawensis YS10 indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic that can influence its interactions with the environment and other microorganisms. The rod shape may also play a role in its motility and ability to colonize various niches. Understanding the genetic structure of Flammeovirga kamogawensis YS10 through its replicons could provide insights into its metabolic capabilities and ecological roles. Given its Gram-negative nature and rod shape, it may be involved in specific biochemical processes in its habitat. This bacterium's traits suggest that it could play a significant role in nutrient cycling or other ecological functions in its environment, although further research would be necessary to clarify its specific contributions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlammeovirgaceae
GenusFlammeovirga
SpeciesFlammeovirga kamogawensis
StrainYS10

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flammeovirga kamogawensis YS10, Complete Genome

Gene Summary

Adenine Count

1582506 bp

Thymine Count

1589502 bp

Guanine Count

749084 bp

Cytosine Count

746783 bp

Genome Length

4667875 bp

Protein-coding Genes

3671 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf814 domain-containing proteinKM029_08755O34693Negative2201760 - 220331961078.2
s1/p1 nucleaseKM029_08760Not AvailableNegative2203380 - 220428535363.6
rna polymerase sigma factorKM029_08765Q7AKG9Positive2204493 - 220499919616.6
3-deoxy-d-manno-octulosonic acid transferaseKM029_08770F0T4D1Positive2205082 - 220632646894.3
ribosome small subunit-dependent gtpase aKM029_08775Q64YJ1Positive2206427 - 220741937362.8
ktsc domain-containing proteinKM029_08780Not AvailablePositive2207494 - 220778411491.9
spoiie family protein phosphataseKM029_08785Not AvailableNegative2207785 - 2210979121662.0
hypothetical proteinKM029_08790Q54CW7Positive2211480 - 221348675911.1
vanz family proteinKM029_08795Not AvailableNegative2213621 - 221406116473.7
peptidylprolyl isomeraseKM029_08800Q9D0W5Positive2214097 - 221473523944.7

Displaying genes 1751 – 1760 of 4660 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.