Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfa family protein | K8M09_03640 | A0A0U1RR11 | Negative | 743784 - 744179 | 13997.1 |
| thiolase family protein | K8M09_03645 | Q6GJ93 | Negative | 744176 - 745369 | 40490.7 |
| amp-binding protein | K8M09_03650 | O07619 | Negative | 745347 - 746834 | 51415.9 |
| biotin transporter bioy | K8M09_03655 | Q2KBP7 | Negative | 746834 - 747397 | 18953.2 |
| energy-coupling factor transporter transmembrane protein ecft | K8M09_03660 | Q2KBP6 | Negative | 747431 - 748036 | 21950.7 |
| energy-coupling factor abc transporter atp-binding protein | K8M09_03665 | Q2KBP5 | Negative | 748030 - 748710 | 24140.4 |
| winged helix-turn-helix domain-containing protein | K8M09_03670 | P75843 | Positive | 748857 - 750056 | 46515.2 |
| hypothetical protein | K8M09_03675 | Not Available | Negative | 750060 - 751019 | 34159.0 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | K8M09_03680 | P47924 | Negative | 751105 - 752205 | 39582.4 |
| chorismate synthase | K8M09_03685 | C3MHI8 | Negative | 752216 - 753313 | 39433.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
