Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | K8M09_04560 | Not Available | + | 916439 - 917605 | 41694.0 |
| Hypothetical protein | K8M09_04565 | P86473 | + | 917608 - 918219 | 22565.1 |
| Portal protein | K8M09_04570 | Q4UM95 | + | 918428 - 919564 | 41566.4 |
| duf6107 family protein | K8M09_04575 | Not Available | + | 919805 - 920113 | 10610.1 |
| Putative prohead protease | K8M09_04580 | P49860 | + | 920240 - 920800 | 20698.1 |
| Phage major capsid protein | K8M09_04585 | Not Available | + | 920815 - 922065 | 44303.5 |
| Dna packaging/head-tail-connector | K8M09_04590 | Not Available | + | 922332 - 922901 | 20514.8 |
| Head closure protein | K8M09_04595 | Not Available | + | 922901 - 923233 | 11896.4 |
| Tail protein | K8M09_04600 | Not Available | + | 923230 - 923637 | 14162.9 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | K8M09_04605 | Not Available | + | 923666 - 924073 | 14137.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.