Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M, Complete Genome
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly complex atpase component tada | K8M09_22675 | Not Available | Negative | 311644 - 312248 | 22099.4 |
| flp pilus assembly complex atpase component tada | K8M09_22680 | P15026 | Negative | 312461 - 313021 | 20447.4 |
| flp pilus assembly complex atpase component tada | K8M09_22685 | O14368 | Positive | 313020 - 313130 | 4046.91 |
| duf779 domain-containing protein | K8M09_22690 | Not Available | Negative | 313563 - 313937 | 13571.2 |
| aldehyde dehydrogenase family protein | K8M09_22695 | A1B4L2 | Negative | 314073 - 315581 | 55178.0 |
| gaf domain-containing protein | K8M09_22700 | P28614 | Negative | 315732 - 316691 | 34481.0 |
| abc transporter permease | K8M09_22705 | Q576D9 | Negative | 316810 - 317604 | 29471.8 |
| 4fe-4s binding protein | K8M09_22710 | Q9HYL3 | Positive | 317717 - 319831 | 76044.4 |
| fad:protein fmn transferase | K8M09_22715 | Q52718 | Positive | 319828 - 320703 | 31019.2 |
| transporter substrate-binding domain-containing protein | K8M09_22720 | P35120 | Negative | 320722 - 321618 | 32686.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
