Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M, Complete Genome
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-disulfide reductase | K8M09_11380 | Q92I02 | Positive | 2283889 - 2284863 | 34745.7 |
| lysr family transcriptional regulator | K8M09_11385 | P30864 | Positive | 2284977 - 2285873 | 33800.6 |
| metalloregulator arsr/smtb family transcription factor | K8M09_11390 | C0H3S9 | Positive | 2286381 - 2286686 | 11289.7 |
| alkene reductase | K8M09_11395 | P77258 | Positive | 2286719 - 2287840 | 39653.5 |
| hypothetical protein | K8M09_11400 | Not Available | Negative | 2287883 - 2288116 | 8376.0 |
| pyridoxal phosphate-dependent aminotransferase | K8M09_11405 | Q02635 | Negative | 2288236 - 2289438 | 43685.3 |
| eal domain-containing protein | K8M09_11410 | Q04855 | Positive | 2289759 - 2290667 | 32911.0 |
| hypothetical protein | K8M09_11415 | Not Available | Positive | 2290843 - 2291043 | 7040.78 |
| pqq-dependent sugar dehydrogenase | K8M09_11420 | P75804 | Positive | 2291118 - 2292287 | 41293.9 |
| dmt family transporter | K8M09_11425 | O29470 | Positive | 2292372 - 2293274 | 31569.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
