Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M, Complete Genome
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf882 domain-containing protein | K8M09_00140 | Not Available | Negative | 30332 - 30808 | 17111.1 |
| tryptophan--trna ligase | K8M09_00145 | Q8UIE8 | Positive | 31078 - 32145 | 39004.0 |
| universal stress protein | K8M09_00150 | Not Available | Positive | 32181 - 32672 | 17618.0 |
| nifu family protein | K8M09_00155 | Q9UMS0 | Positive | 32770 - 33339 | 20260.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | K8M09_00160 | P9WKY6 | Positive | 33370 - 34017 | 21728.1 |
| gnat family n-acetyltransferase | K8M09_00165 | P0A946 | Positive | 34019 - 34513 | 17824.4 |
| transcriptional repressor | K8M09_00170 | O07315 | Positive | 34550 - 34975 | 16407.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | K8M09_00175 | Q7APG1 | Positive | 35046 - 35834 | 28903.8 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | K8M09_00180 | A6U5H0 | Positive | 35886 - 37256 | 50645.9 |
| phoh family protein | K8M09_00185 | P46343 | Positive | 37284 - 38336 | 38607.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
