Chryseobacterium oryzae ADR-1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium oryzae ADR-1 is a rod-shaped bacterium known for its distinct genetic characteristics, including the presence of three replicons. The genetic material of this organism is cataloged under several accessions, specifically CP094529.1, CP094530.1, and CP094531.1. This bacterium is part of the Chryseobacterium genus, which is recognized for its diversity and adaptability in various environments. The rod shape of C. oryzae ADR-1 suggests it can exhibit versatile motility and potentially engage in different ecological niches, which is typical for rod-shaped bacteria. The presence of three replicons indicates a complex genomic structure that may contribute to its adaptability and resilience in various environments. This complexity can facilitate the acquisition of novel traits, possibly enhancing its survival in diverse ecological conditions. In an ecological context, the ability of C. oryzae ADR-1 to thrive in varied habitats may play a significant role in nutrient cycling and the biodegradation of organic matter. Such capabilities can be crucial for maintaining ecosystem balance. The traits of C. oryzae ADR-1 emphasize its potential significance in environmental microbiology, particularly in understanding bacterial roles in ecological processes and their interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium oryzae
StrainADR-1

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium oryzae ADR-1, Complete Genome

Gene Summary

Adenine Count

1032683 bp

Thymine Count

1031662 bp

Guanine Count

530154 bp

Cytosine Count

536764 bp

Genome Length

3131263 bp

Protein-coding Genes

2774 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tpm domain-containing proteinMTP08_02410Not AvailableNegative515316 - 51574716418.5
lema family proteinMTP08_02415A8AVK0Negative515747 - 51635522678.1
dihydrofolate reductaseMTP08_02420P11045Positive516431 - 51692518710.5
duf2892 domain-containing proteinMTP08_02425Not AvailablePositive517002 - 51757122021.5
trimeric intracellular cation channel family proteinMTP08_02430Q9R9S0Negative517643 - 51827523332.5
pantetheine-phosphate adenylyltransferaseMTP08_02435A5FGN1Negative518348 - 51881217689.4
d-alanine--d-alanine ligaseMTP08_02440A6GXD5Negative518893 - 51987636523.5
adp-forming succinate--coa ligase subunit betaMTP08_02445A5FHX8Positive520194 - 52138442514.1
rsmb/nop family class i sam-dependent rna methyltransferaseMTP08_02450B4F1L5Positive521614 - 52281945973.7
pasta domain-containing proteinMTP08_02455Q8R9T6Positive522986 - 52402338004.9

Displaying genes 481 – 490 of 2942 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.