Chryseobacterium oryzae ADR-1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium oryzae ADR-1 is a rod-shaped bacterium known for its distinct genetic characteristics, including the presence of three replicons. The genetic material of this organism is cataloged under several accessions, specifically CP094529.1, CP094530.1, and CP094531.1. This bacterium is part of the Chryseobacterium genus, which is recognized for its diversity and adaptability in various environments. The rod shape of C. oryzae ADR-1 suggests it can exhibit versatile motility and potentially engage in different ecological niches, which is typical for rod-shaped bacteria. The presence of three replicons indicates a complex genomic structure that may contribute to its adaptability and resilience in various environments. This complexity can facilitate the acquisition of novel traits, possibly enhancing its survival in diverse ecological conditions. In an ecological context, the ability of C. oryzae ADR-1 to thrive in varied habitats may play a significant role in nutrient cycling and the biodegradation of organic matter. Such capabilities can be crucial for maintaining ecosystem balance. The traits of C. oryzae ADR-1 emphasize its potential significance in environmental microbiology, particularly in understanding bacterial roles in ecological processes and their interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium oryzae
StrainADR-1

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium oryzae ADR-1, Complete Genome

Gene Summary

Adenine Count

18904 bp

Thymine Count

18957 bp

Guanine Count

9820 bp

Cytosine Count

9532 bp

Genome Length

57213 bp

Protein-coding Genes

50 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thymidine kinaseMTP08_00010Q8A5G4Positive618 - 120221748.0
bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemaseMTP08_00015Q890X1Positive1273 - 372092945.0
patatin-like phospholipase family proteinMTP08_00020O34731Positive3725 - 588181321.5
rrna maturation rnase ybeyMTP08_00025A5FL87Positive5885 - 629216321.4
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgMTP08_00030A0M6J7Positive6493 - 835569404.2
class i sam-dependent methyltransferaseMTP08_00035Q58648Positive8434 - 925532093.5
phosphoglycerate kinaseMTP08_00040Q8A753Negative9470 - 1066042847.5
duf4139 domain-containing proteinMTP08_00045O44400Positive11255 - 1283560490.8
ribose 5-phosphate isomerase bMTP08_00050P39156Positive12846 - 1328016024.0
hypothetical proteinMTP08_00055Not AvailablePositive13475 - 1420328723.6

Displaying genes 1 – 10 of 2942 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.